Sweetfuel Project Methodology Functional analysis
This WP identifies useful traits in sweet sorghums for bio-ethanol production, and characterizes their physiological and genetic basis. It evaluates phenotypic expression of such straits alone and in combination and on that basis, develops ideotype concepts as targets for breeding.
1. Investigate carbohydrate accumulation in sweet sorghum stems in the context of whole-plant functioning, and characterize its trade-offs with grain and biomass production. This work includes regulatory processes and the action of key enzymes.
2. Investigate the phenotypic relationships among traits for sugar accumulation, plant phenology (including photoperiod sensitivity), stay-green (or leaf longevity) and late-season drought tolerance.
3. Translate these results into ideotype concepts combining useful traits in a biologically compatible and agro-ecologically coherent way. Ideotypes may target single-purpose (bio-fuel) or pluri-purpose (bio-fuel, grain and forage) applications.
4. Translate the ideotype concepts into practical phenotyping methodologies for large populations, including model-assisted measurement of relevant physiological (process-based) traits.
5. Identify candidate genes/gene sequences for drought tolerance from (1) subtractive cDNA microarray analysis for stress and control treatment pairs, and (2) association mapping using SNPs.
6. Identify useful markers for MAS from results obtained for objective 5.
7. Provide to Consortium breeders novel traits and trait combinations, as well as suitable phenotyping methodologies; and molecular markers for MAS for enhanced and accelerated selection, specifically for drought tolerance
Task 4.1. Detailed phenotypic analysis of physiological traits
Task 4.2. Field drought testing of reference materials in Mexico
Task 4.3. Model improvement and application for ideotype definition
Task 4.4. Investigation of enzymatic and metabolomic traits
Task 4.5. Develop molecular markers for drought tolerance
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